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    Saved Genes
      SPT5CGD
      C2_01480W_A|orf19.1453CAL0000192268
      Protein similar to S. cerevisiae Spt5p transcription elongation factor; transposon mutation affects filamentous growth
      InVitro Pooled
      Temp37_effect_size
      FBS_effect_size
      YPD_effect_size
      SDS_effect_size
      NoIron_effect_size
      NaCl_effect_size
      Sorbitol_effect_size
      YNB_effect_size
      See explanation for features in paper: Fu, C., Zhang, X., Veri, A.O. et al. Leveraging machine learning essentiality predictions and chemogenomic interactions to identify antifungal targets. Nat Commun 12, 6497 (2021). https://doi.org/10.1038/s41467-021-26850-3
      FeatureValuePlot
      version
      2.00
      Note
      N/A
      Registry ID
      GELC0005
      Merck Strain ID
      N/A
      Plate
      Plate 01
      Position
      A09
      No_DOX_score
      0.00
      DOX_score
      1.25
      Essential_verdict
      GD

      In Vitro Arrayed Screen

      GRACE microscopy image
      Reference SC5314
      Reference: SC5314
      30C • DOX • GRACEv2
      DOX at 30°C

      Filamentation Screen

      co-culture with macrophages w/ FITC-conjugated anti-Candida albicans antibody

      Filamentation MO FITC REP1

      co-culture with macrophages w/ phase and FITC channel images

      Filamentation MO Merge REP1

      tissue culture conditions

      Filamentation TC REP1
      Details

      The screen took place over two days - each plate was screened in technical duplicate both in co-culture with macrophages (MO) and in monoculture under tissue culture conditions (TC). For the TC screen, only phase images were acquired. For the MO screen, co-cultures were stained using a FITC-conjugated anti-Candida albicans antibody therefore phase and FITC channel images were acquired. Each mutant has 6 corresponding images: 2 phase images from the TC screen (one per replicate) - 2 FITC channel images from the MO screen - and 2 merge (phase + FITC) images from the MO screen. GRACE plates 1-17 were screened in duplicate on one day - alongside one replicate of plate 25 and GRACE plates 18-24 were screened in duplicate on another day - alongside the second replicate of plate 25.

      Publication

      Case NT, Westman J, Hallett MT, Plumb J, Farheen A, Maxson ME, MacAlpine J, Liston SD, Hube B, Robbins N, Whitesell L, Grinstein S, Cowen LE. (2023). Respiration supports intraphagosomal filamentation and escape of Candida albicans from macrophages.

      mBio 14:e02745-23